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… between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … to support a forest, and species vary across Earth’s ecosystems.  Recently, in work  published in  New Phytologist , …

Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … for multiple applications.       Despite advances in sequencing technologies and computational methods in the … Berkeley National Laboratory (Berkeley Lab), and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the …

… around the country recognize that crop varieties grow best in certain regions. Most plant species have adapted to their … crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying … across the chromosomes. “In the past, we needed model systems to test genetic hypotheses in species with large and …

… for JGI’s Secondary Metabolites group. His research interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene … (1996) … List available on Google Scholar … Education … Publications …

… technologies and methodologies that facilitate discovery of new secondary metabolites. Prior to joining the JGI, he … Nov 7;12(1):18909. Otani H, Mouncey NJ. RIViT-seq enables systematic identification of regulons of transcriptional … Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …

Research in the Analysis R&D group focuses on developing new … and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer … the Wang group has developed customized data analyses and software to enable “grand-scale” scientific projects. These … metagenome binning software … Education … Selected Publications … Software …

Kjiersten Fagnan began working with JGI in 2012 as a NERSC bioinformatics computing … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …