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The Power of One, Amplified
A preview of how large-scale single cell genomics complements … sample. Their work showed that single cell genomics can add significant value to the other commonly used … microbes help regulate the planet’s nutrient cycles and are potentially of use in fields ranging from agriculture to …
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Jie Guo
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JGI@25: Roots of a Mutualist Relationship
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … for Agriculture, Food and Environment (INRAE). Today, there are nearly 200 mycorrhizal fungal genomes publicly available …       Francis Martin on the main impact of ectomycorrhizal fungi, excerpted from his talk at the 2015 JGI Annual …
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Recent Activity in Expanding Populations and Purifying Selection Have Shaped Transposable Element Landscapes across Natural Accessions of the Mediterranean Grass Brachypodium distachyon
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. … walks through the JGI’s sequencing pipeline, where there are freezers with names — but not doors — and robots handle …
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Rex Malmstrom
… … Ph.D. in Marine Biology/Biochemistry, University of Delaware BA in Biology, Boston University ( magna cum laude ) … … interactions in the hyphosphere of arbuscular mycorrhizal fungi. Microbiome 199 Needham, D.M. et al. 2019. A distinct … dissertation in life sciences 2006 … Education … Selected Publications … Awards and Honors …
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Expanding Virophage Diversity
Virophages are small viruses with double-stranded DNA genomes that co-infect eukaryotic cells along with … wastewater, and even animal and human (for the first time) gut and taxonomically classified into 27 distinct clades (17 …
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Plant Pan-Genomics Comes of Age
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Calculating the Costs of Multiple Switchgrass Gene Copies
Scientists have discovered that the candidate bioenergy feedstock switchgrass has adapted to … A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for … they asked – and answered – in the study that recently appeared in the Proceedings of the National Academy of Sciences …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Proposals aim to sequence and annotate genomes from Antarctica to Africa to global … accepted through JGI’s calls. Nearly 200 Terabases of data are expected to be generated for the accepted proposals, … bacteria play on mating habits of Mucoromycota fungi, and their effects on these oil-producing species. …
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A Shrubbier Version of Rubber
Right now, our natural rubber comes from just one tree species: Hevea … latex that becomes rubber, but it’s vulnerable to disease and climate shifts. So researchers are looking into a desert shrub that’s native to North …
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JGI Announces 2025 New Investigator Portfolio
Pictured from left: [Top] Bill J. Baker, Jeff Barrick, Ian Gilman, Louis Graf, Yuxi Guo, Shaomei He, Vayu Hill- … of our  Community Science Program , allows us to work and share our tools with a widening circle of researchers whose … including the genomic dynamics of biofuel-producing fungi, the effects of biochar on rhizosphere microbiomes, …
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