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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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Calculating the Costs of Multiple Switchgrass Gene Copies
Scientists have discovered that the candidate bioenergy feedstock … A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for … by our research team surveying the genomic and phenotypic diversity across the natural range of switchgrass found that …
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Massie S. Ballon
Massie S. Ballon is the Communications and Outreach Manager … in science communication from UC Santa Cruz. She is one of the Biosciences Area representatives to Berkeley Lab’s Inclusion, Diversity, Equity & Accountability (IDEA) Chairs Council.   …
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Data Ecosystem
To expand access to integrated data, improve tools and infrastructure … cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … to facilitate these efforts. Particular areas of emphasis will be the development of tools and …
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Tracing the Evolution of Shiitake Mushrooms
New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
New 5-year strategic plan outlines how the JGI will advance the … for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … for bioproducts to support the bioeconomy. Functional diversity theme. Reading the genomes of individual organisms …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing … of viruses that had in their genomes a surprising tool: a “diversity generating retroelement,” or DGR. The DGR could …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 2022 marks the JGI’s 25th anniversary. Over the last year, we’ve been revisiting a number of notable achievements that showcase our collaborations and … sample, or a rumen sample, you’re going to find beautiful diversity.”  Within that diversity of bacteria and fungi, …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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RNA-Dependent Cysteine Biosynthesis in Bacteria and Archaea
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A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea
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A pipeline for targeted metagenomics of environmental bacteria
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