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Laying the Foundation for a Genomic Rosetta Stone: Creating Information Hubs through the Use of Consensus Identifiers
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Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… Session and Rokhsar, building on work with former JGI postdoc Jarrod Chapman, developed a method to correctly … method can be  accessed here so that, Session said, other scientists can “follow a step-by-step process to apply it to … genes from all possible candidate ancestors are available. Our method clearly identifies the four subgenomes based on …
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Alabama A&M Interns Access An Abundance of Knowledge
… enriching workshops and networked with fellow interns and scientists alike. Want to learn more about their experience? … A&M University this fall for my master’s in plant soil science and my career focus is plant breeding. Ti’Yanna … a JGI intern means not only just watching and observing your mentor, but also being a support for them and …
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The More the Merrier: Making the Case for Plant Pan-genomes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … these datasets, researchers made a pan-genome containing four  B. hybridum  genomes and many  B. distachyon genomes. …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, long-read DNA sequences to aid … PacBio reads (i.e., reads with very low error rate), so our pipeline performs long-reads-only assemblies and not … Depending on the project setup, we can include as part of our data analysis plan mapping of short-reads datasets …
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Complete genome sequence of Deinococcus maricopensis type strain (LB-34T)
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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The genome of the intracellular bacterium of the coastal bivalve, Solemya velum: a blueprint for thriving in and out of symbiosis
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Decoding Yellowstone’s Microbial Mats
… Along the way, they’ve encountered surprises, adopted new technologies, and made a few discoveries about the microbial …
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A Community Resource for Secondary Metabolite Researchers
… The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Institute (https:// ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by the Office of Science …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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