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Complete Genome Sequences for the Anaerobic, Extremely Thermophilic Plant Biomass-Degrading Bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and
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The Genomes of the Fungal Plant Pathogens Cladosporium fulvum and Dothistroma septosporum Reveal Adaptation to Different Hosts and Lifestyles But Also Signatures of Common Ancestry
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Exploring and Thinking Critically about Scientific Problems with JGI Interns
While summer interns at the JGI from multiple programs had their own goals to achieve, they constantly … with each other on new ways of presenting and researching science. …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… that crop varieties grow best in certain regions. Most plant species have adapted to their local environments; for … propagated from cuttings represent a diverse collection sourced from half of the United States. As  reported January … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Understanding Wildfire Recovery, Starting in Soil
… at the soil microbes present a year after a wildfire. The Science After a wildfire burns, recovery begins at the … process carbon and nitrogen, paving the way for future plants and trees to grow. However, fire changes the microbes … for User Science (FICUS) initiative and used resources at the Environmental Molecular Sciences Laboratory …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of "primary … BGC sequences. Expansion of the SMC to include fungal, plant, viral, and metagenome data is currently underway. … …
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Katherine Louie
… biological and environmental samples in support of user science.  Capabilities offered by the platform are a result … Discovery. 2020.  Reference Module in Chemistry, Molecular Sciences and Chemical Engineering.  DOI: … Transitions in the Green Alga Chromochloris zofingiensis. Plant Cell. 2019;31: 579–601. 5. Erbilgin O, Rübel O, Louie …
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Draft Genome Sequence of Frankia Strain G2, a Nitrogen-Fixing Actinobacterium Isolated from Casuarina equisetifolia and Able To Nodulate Actinorhizal Plants of the Order Rhamnales
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The draft genome sequence of the ascomycete fungus Penicillium subrubescens reveals a highly enriched content of plant biomass related CAZymes compared to related fungi
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Phylogenomics reveals convergent evolution of red-violet coloration in land plants and the origins of the anthocyanin biosynthetic pathway
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PlantSEED enables automated annotation and reconstruction of plant primary metabolism with improved compartmentalization and comparative consistency
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De novo transcriptome assembly of drought tolerant CAM plants, Agave deserti and Agave tequilana
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