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Streamlining Regulon Identification in Bacteria
… technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory protein. Researchers demonstrated the efficacy and …
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David Goodstein
… at Cornell, IBM, Utah State University, and semiconductor equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to facilitate expert curation of human gene models in support of JGI’s contributions to …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … of viruses in the same drop—the vast majority not harmful to humans could be even larger. Viruses infect bacteria, … and they range in particle and genome size from small, to large and even giant. The genomes of giant viruses are on …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
As part of the JGI’s 25th anniversary celebration, the 2022 Annual … featured speakers who shared a look back at the JGI’s history, from its beginnings in the sequencing for the Human Genome Project out to the future of the institution. Their talks shed light on …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
Though visible to the naked eye, microscopy reveals unexpected complexity … the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even lighter …
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Benjamin Cole
… studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was … Dr. Cole is focusing on how individual plant cells respond to their biotic environment using emerging single-cell … (scRNA-seq, Spatial Transcriptomics). … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint … which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … and involves more than 17 research groups. The team set out to characterize the transcriptome – the complete set of RNA …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on a changing planet. Transcript for Audio   …
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