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Genomic variation in 3,010 diverse accessions of Asian cultivated rice
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Supercharging SIP in the Fungal Hyphosphere
High-throughput stable isotope probing helps ID novel interactions between bacteria and fungi … successfully automated aspects of a commonly-used process for studying microbial communities, with results published in the  …
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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in cell-free environments? … to make products such as proteins, and the mechanisms for maintenance to keep processes running smoothly. As … synthesis of sustainable chemical products,” said Jewett, one of the study’s senior authors. “But this has been done …
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Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
Congratulations to Susannah Tringe , one of eight scientists and engineers who received … highest honors! Tringe, a microbiologist, was recognized for “advances in sequence-based studies of microbial assemblies, revealing the roles of microbial …
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An Automated Tool for Assessing Virus Data Quality
… virus sequences vary widely. In a previous effort, an international consortium recommended specific … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … boundary clearly defined using functional annotation methods, it was possible to distinguish between metabolic …
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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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High-resolution phylogenetic microbial community profiling
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A Comparison of Microbial Genome Web Portals
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The Integrated Microbial Genome Resource of Analysis
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Partnerships: Myco-Ed
The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based … Research Experience (CURE) that consists of coordinated hands-on experiments across fungal biology teaching … to biological inference and understanding of fungal diversity, ecology, and potential applications. … The …
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Adopt-A-Genome
In this episode, undergraduates adopt genomes that the JGI … and publish first-author papers, making the data available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about how the Adopt-A-Genome … and Mark Soghomonian share what it was like to take on one of these genomes.  …
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