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The Power of One, Amplified
… mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that dominant … bacterial lineage was identified from microbial and metagenome sequence data sets generated from a handful of … dataset (a.k.a. 16S rRNA gene sequencing), a shotgun metagenome, and a single cell dataset of nearly 500 single …
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Alabama A&M Interns Access An Abundance of Knowledge
Alabama A&M University this fall for my master’s in plant soil science and my career focus is plant breeding. Ti’Yanna … is the area surrounding the roots of a plant in the soil. And I’m specifically working with a grass plant that’s …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… peatlands store approximately one-third of the world’s soil carbon. The process to harvest energy-generating peat … species, some sphagnum may prefer the dryer, more elevated soil of the hummocks or the more water-logged hollows below. …
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JGI@25: Solving the Mystery of the Missing Oil
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Uncovering Novel Genomes from Earth’s Microbiomes
… sequencing and analysis. “Using a technique called metagenome binning, we were able to reconstruct thousands of metagenome-assembled genomes (MAGs) directly from sequenced … and environments, including natural and agricultural soils, human- and animal-host associated, and ocean and …
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An Automated Tool for Assessing Virus Data Quality
… being recovered and identified from environmental samples (metagenomes). However, the quality and completeness of metagenome-assembled virus sequences vary widely. In a … to help researchers assess and improve the quality of metagenome-assembled viral genomes . The Impact The microbes …
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JGI Scientists Pen Genome Watch Articles
… characterizing the human microbiome  by its genomes and metagenome , rather than just by 16S ribosomal RNA gene censuses.  Emiley Eloe-Fadrosh ,  Metagenome Program lead, shone a spotlight on  ammonia …
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Cataloging the Microbes that Manage the Health of River Systems
Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established standardized sequencing …
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NeLLi — Symposium on New Lineages of Life
Schulz,  New Lineages of Life Lead Emiley Eloe-Fadrosh, Metagenome Program Tanja Woyke, Microbial Program Robert …
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Three Join the JGI User Executive Committee
… is a staff scientist at PNNL and thrust lead on PNNL’s Soil Microbiome SFA. She serves as Secretary within the … in how microbes influence biogeochemical cycles in soils and sediments and plant-microbial interactions in …
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The Expanding Universe of Methane Metabolisms in Archaea
Metagenome-assembled archaeal genomes provide new insights … DOE Office of Science User Facility, for publicly available metagenome data provided by the other study co-authors, and reconstructed from these 10 metagenome-assembled genomes (MAGs) representing new …
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