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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… to spread across most of the plant’s ecosystems. The Impact For decades, the liverwort  M. polymorpha has been used as a … a resource that associates plant’s genetic variants with specific adaptation mechanisms they had identified. For … and later plant lineages that independently expanded. Along with NLRs, the diversified peroxidases are associated with …
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Busting the Unbreakable Lignin
… to tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, … anaerobic fungi could be used to effectively modify lignin without oxygen and make use of it, it would change the … is well-established: Across all life forms and with little exception, organisms have figured out how to …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate change impact on marine microbial … carbon from the atmosphere and keeps it in the deep ocean. With genomic samples collected before, during and after The … organic matter scavengers. This preliminary model aligns with several other studies on the potential effects of …
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SPRUCE-ing Up Science
A former JGI intern is now applying his internship lessons on … Oak Ridge, Tennessee. Recently, Lawrence, in collaboration with researchers from ORNL, Lawrence Berkeley National … internship and investigations began.    Lawrence was paired with program co-founder and JGI mentor, Zhong Wang. …
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Emiley Eloe-Fadrosh
… samples to identify and characterize genomic information from uncultivated microbes and viruses. Prior to joining the JGI, she was a Bioinformatics Program Fellow at the Gordon and Betty Moore … Foundation; Schmidt Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …
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Yasuo Yoshikuni
… of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and applications. This … His research focus includes engineering of non-model yeasts for production of biofuels and renewable chemicals, … in Chemical Engineering … DNA Synthesis Science Program … Education … Selected Publications … Awards and Honors …
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Accelerating Metagenomics Discoveries with Deep Learning
Lab) and other institutions shared their works-in-progress with 86 participants in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing … to become much simpler; instead of aligning sequences with popular, but computationally costly approaches such as …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… plants don’t fully decompose in peatlands, and so carbon within their tissues doesn’t return to the atmosphere. Peat … by minimizing flood risks and filtering water. Peat formed there over thousands of years sequesters more carbon … kingdom. Specifically, researchers found that female plants within a species tended to weather pH stress from peatlands’ …
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Simon Roux
… approaches to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of … 2018 Senior Editor: Microbiology Resource Announcements … Education … Selected Publications … Awards and Honors …
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Crysten Blaby-Haas
Science in 2011 from the University of Florida, working with Valérie de Crécy-Lagard on using comparative genomics … joint user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … homeostasis. PNAS  111(50): E5480-E5487.  Google Scholar … Education … Awards and Service … Selected Publications …
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Hiroshi Otani
… griseus. Mol. Microbiol. 87, 1223-1236. PubMed … Education … Publications …
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Zhong Wang
… in the Analysis R&D group focuses on developing new bioinformatics solutions to support JGI in adopting new genomics … scientists and biostatisticians. Through collaborations with internal and external scientists, the Wang group has … MetaBAT , an automatic metagenome binning software … Education … Selected Publications … Software …
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