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… diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the same … often source their nutrients — the shii tree, a Japanese relative of the oak. These fungi are part of the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… Matt is broadly interested in the interactions between microbial life and environment, and using metagenomics to study these complex natural systems. Microbial …

… (Clustered Regularly Interspaced Short Palindromic Repeats) is the leading tool for accurately editing genomes, its … By employing CRAGE, researchers are no longer limited to using model host microbes; theoretically, any microbe can … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… This webinar focused on how the JGI employs single-molecule, long-read DNA sequences to aid … recently, these long-reads have been applied to DNA methylation analysis as well as improving metagenome assemblies. … of the library. 6mA and 4mC (~50x depth), 5mC (~250x depth required). Methylation detection currently only …

… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could … fruit to go unripened and a blotchy yellowing of leaves, a team of researchers sequenced  P. trifoliata ’s genome. … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… more broadly, land plant evolution. Recent findings in Ceratopteris richardii show a long history of dynamic evolution … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … could not explain the massive size of most fern genomes. A team of researchers put together a chromosomal genome …

… Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, … of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial …