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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, … an array of defense mechanisms. The Impact There are over 10,400 species of ferns alive today. Boasting adaptations in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State University … the microbiology of watershed systems, they utilized over 160 river water samples collected through WHONDRS, a …
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Synthetic Biology Informatics Group
Software engineers in the Synthetic Biology Informatics Group … develop, deploy, and maintain software that support the JGI’s Synthetic Biology Program .  Representative software … and associated tools, which track samples through the JGI’s Synthetic Biology pipeline as well as provide process …
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New Research Sheds Light on Diversity in the Deep Sea
… vents are typically found along mid-ocean ridges where tectonic plates pull apart. As those plates separate, seawater … function in such extreme conditions. They identified 511 new or recently discovered genera of bacteria and … the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …
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Jane Grimwood Named HudsonAlpha Genomics Chair
Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began … JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human Genome Center … Genetics paper describing the genomes of the five major cotton lineages. Grimwood was also part of the JGI team that …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
As set out in the JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision … to the resources and disciplines advanced by the JGI, we seek to inspire more students to enter the science, … to further develop a more diverse and inclusive pool of talent for career opportunities at JGI and Berkeley Lab. …
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A Mentor’s Perspective on Training the Next Generation
Over the years, hundreds of interns have come to the JGI from all parts of the globe … they’ve all mentioned how invaluable their time at the JGI was and how great it was to have an experienced career …
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and … deep underground, and before the pandemic, they took the JGI on a sampling field trip. One of the questions they’re … National Laboratory. Letters of Intent are due March 16, 2022 to freely access resources at multiple DOE user …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… industry, and government organizations for three days of scientific presentation, interactive panel discussions, workshops, and informal networking events. JGI will present both a genome center talk and a tech talk. Stop by the JGI booth to learn about our user programs and how we can …
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Virus-Microbe Interactions of Mud Island Mangroves
… a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science Graduate Student … collaborations taking place. I am planning to enter the Boston biotech startup scene as a computational biologist. My …
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Kanwar Singh
Kanwar spends part of his time assisting JGI users by processing their single …
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Adopt-A-Genome
In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These … available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about … and Mark Soghomonian share what it was like to take on one of these genomes.  …
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