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Len Pennacchio
In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and … in Genome Biology & Technology-Precision Health” 2013-  Instructor Leena Peltonen School of Human Genomics, Sanger Center 2011-  Co-Organizer “Systems Biology of Gene Regulation and Genome Editing,” Cold …
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Better Genome Editing for Bioenergy
… the axe.” In this study,  published in  Metabolic Engineering , a team of researchers likewise honed their … genes were essential to  Y. lipolytica . They identified 1,377, or 17.5 percent, of  Y. lipolytica ’s genes to be … rife with false negatives: that time, the team only found 359 genes to be essential. The team also tested for genes …
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JGI@25: Studying Sorghum’s Survival Skills
… which is the fastest way for plants to convert carbon dioxide and water into sugars and oxygen. Both … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have cited that genome. Since publishing that …
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Ancient Algae Reveal Secrets of Plant Evolution
Science Foundation (NSF) CAREER award (DBI-1652164, 1933521), the Nebraska Tobacco Settlement Biomedical Research … no. DE-AC02-05CH11231. P.-M.D is supported by the project Engineering Nitrogen Symbiosis for Africa (ENSA) currently … and the UK Foreign, Commonwealth and Development Office as Engineering Nitrogen Symbiosis for Africa (OPP1172165), by …
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High quality permanent draft genome sequence of Chryseobacterium bovis DSM 19482T, isolated from raw cow milk
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Extracting the Secrets of Secondary Metabolites
CRAGE (Chassis-independent Recombinase-Assisted Genome Engineering) is a technique researchers can use to integrate … User Facility, is supported under contract DE-AC02- 05CH11231. …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
… 20 UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, … underrepresented minorities in science, technology, engineering and math (STEM) fields. More than 20 UC Merced … graduate intern): In her final year in the Quantitative & Systems Biology PhD program at UC Merced under the …
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Tanja Woyke
Eberhard Karls University of Tübingen, Germany … 2018-2023 Highly Cited Researcher, Biology and Biochemistry, top 1%, … 2020 van Niel International Prize for Studies in Bacterial Systematics 2020 Elected fellowship in the American Academy … Giant viruses with an expanded complement of translation system components. Science 356, 82-85. Tsementzi et al. …
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Identifying the Microbial Cleanup Crew at a Superfund Site
JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the team has since identified  … understand the ERD process.  … The work (proposal:  10.46936/10.25585/60000717 ) conducted by the U.S. Department of … Energy Joint Genome Institute (JGI) ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… on cone snails, C. californicus in particular, as a model system for venom-microbe interactions. Cone snail venom has … 20 UC Merced students have contributed to the research of 13 JGI scientists through the JGI-UC Merced Genomics …
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Uncovering Novel Genomes from Earth’s Microbiomes
Berkeley National Laboratory (Berkeley Lab), and the  DOE Systems Biology Knowledgebase (KBase) . Metagenomics is the … microbes.” Teams of researchers worked on multiple analyses harnessing the genome repository, and the IMG/M team … BGCs in  IMG/ABC (Atlas of Biosynthetic Gene Clusters) by 31%. ( Listen to this JGI Natural Prodcast episode on genome …
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JGI Scientists Pen Genome Watch Articles
… .  The latest article, published January 27, is about engineering plants and their microbiomes for more … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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