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JGI at the AGU Fall Meeting
… context for thousands of newly sampled microbial genomes from North American watersheds (Invited)” 4pm CST … Lab (short talk): “How do we make interdisciplinary sample data more FAIR?” December 16 7:55am, Convention Center Rm … “EMSL’s 1000 Soils Project: core collection strategy and data types available” December 17  6:40am Convention Center …
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Crawling through time: Transition of snails to slugs dating back to the Paleozoic, based on mitochondrial phylogenomics
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Matthew Kellom
… and using metagenomics to study these complex natural systems. Microbial communities living in hard-to-reach … supports various CSP and FICUS user projects for the Metagenome Program. …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… director of Berkeley Lab’s Environmental Genomics and Systems Biology Division, and JGI’s deputy for user programs. She also leads the JGI’s Microbial Systems group. The award ceremony was held January 19, 2021. …
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Streamlining Regulon Identification in Bacteria
… in Streptomyces coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions … environments are expressed when their functions are needed. Data yielded through RIViT-seq expand the known … S. coelicolor . With results from the research, RIViT-seq data have increased the identification of the number of …
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When “The Blob” Made It Hotter Under the Water
Data from marine heatwave event may foreshadow climate … were sequenced by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … in marine microbial communities. Using the JGI-generated data, Sachia Traving, a former postdoctoral fellow in the …
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JGI@25: The Little Alga That Could
… of those shared by both humans and flowering plants). Its genome also contains hundreds of genes uniquely associated … JGI’s early sequencing of C. reinhardtii became available, data mined by the JGI shows that those sequences have been … on PhycoCosm … C. zofingiensis on Phytozome … Algal Datasets … Plant Datasets …
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Overview of the Genomes OnLine Database (GOLD)
TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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Daniel Udwary
… interests lie in use and development of bioinformatics tools for elucidation of biosynthetic gene clusters in …
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Functional analysis of Salix purpurea genes support roles for ARR17 and GATA15 as master regulators of sex determination
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Characterizing Communities: JGI Announces Latest CSP Portfolio
Proposals aim to sequence and annotate genomes from Antarctica to Africa to global oceans. Through … accepted through JGI’s calls. Nearly 200 Terabases of data are expected to be generated for the accepted … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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The Phaeodactylum genome reveals the evolutionary history of diatom genomes
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