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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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Enrichment of root-associated Streptomyces strains in response to drought is driven by diverse functional traits and does not predict beneficial effects on plant growth
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Triggering Morel Fruiting
… an external source.  The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic … carbon from lignocellulosic-abundant matters such as plant litter and to incorporate the assimilated carbon into … The genome sequences and annotations are available on JGI’s fungal portal  MycoCosm . Based on these analyses, we …
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The complete mitochondrial genome of the conifer needle endophyte, Phialocephala scopiformis DAOMC 229536 confirms evolutionary division within the fungal Phialocephala fortinii s.l. – Acephala appalanata species complex
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Dan Rokhsar
… in the sequencing and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s … on understanding the origin, evolution, and diversity of plants and animals by combining computational genome … In addition to this evolutionary focus, his work on plant genomics is targeted towards the development of …
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Webinar: SIP technologies at EMSL and JGI
… 8. Q:  Related to Jim Moran’s talk, how long do plants need to be placed in a 13 CO2 chamber for sufficient … labeling? A:  If you’re looking for the label in the plant, it could be as short as 24 hours.  If you’re looking … into the rhizosphere, so the label has to go into the plant, out through the roots, into the soil, and then picked …
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Integrative visual omics of the white-rot fungus Polyporus brumalis exposes the biotechnological potential of its oxidative enzymes for delignifying raw plant biomass
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Complete Genome Sequences for the Anaerobic, Extremely Thermophilic Plant Biomass-Degrading Bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and
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The Mutualist Laccaria bicolor Expresses a Core Gene Regulon During the Colonization of Diverse Host Plants and a Variable Regulon to Counteract Host-Specific Defenses.
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The CC–NB–LRR protein BSR1 from Brachypodium confers resistance to Barley stripe mosaic virus in gramineous plants by recognising TGB1 movement protein
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Natural Prodcast Episode 22: Alison Narayan
… from having a much more complicated ligand to wrestle with computationally and pyramidalization is that we need good …
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Deletion of either the regulatory gene ara1 or metabolic gene xki1 in Trichoderma reesei leads to increased CAZyme gene expression on crude plant biomass
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