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Metagenome-assembled genomes from microbial communities producing lactic acid from dairy residues
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Variability in depth-mediated shifts in methanogen and methanotroph communities across tropical Andean mountain peatlands
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The relationship between gene traits and transcription in soil microbial communities varies by environmental stimulus
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Methane-fed microbial communities enriched from field-grown rice support diverse heterotrophic bacteria
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When “The Blob” Made It Hotter Under the Water
… carbon from the atmosphere and keeps it in the deep ocean. With genomic samples collected before, during and after The … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Lab), as part of Hallam’s approved proposal through the Community Science Program . The proposal focuses on …
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First Monoploid Reference Sequence of Sugarcane
… species, sequencing programs generally focus on a genotype with two identical sets of chromosomes to produce a … polyploid sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in … BioEnergy Institute, support was provided by the Office of Science of the U.S. Department of Energy under Contract No. …
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Leadership
… convening of advisory committees to guide the direction of programs and initiatives to enhance the JGI’s preeminence as a national resource. Members report to the JGI Director. …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a … (Berkeley Lab) describes it, JGI researchers have also collaborated to advance computing infrastructure and … such tools has been a collaborative effort. For example, with support from the  Exascale Computing Project , the JGI …
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Busting the Unbreakable Lignin
… fungi can degrade the hardiest of plant components   The Science There are three main ingredients to tackle when it … anaerobic fungi could be used to effectively modify lignin without oxygen and make use of it, it would change the … Research Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential …
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Corymbia Genome Expands Terpene Synthesis Knowledge
… terpene synthase gene family across eucalypt lineages. The Science From the distinct smell of eucalyptus to the flavor … Corymbia are more abundant in the drier parts of Australia with lower quality soils and even in the desert areas with … proposal by the DOE’s Joint BioEnergy Institute (JBEI), the JGI worked on resequencing several eucalypt genomes to …
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Shotgun metagenome data of a defined mock community using Oxford Nanopore, PacBio and Illumina technologies
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Ecological and genomic responses of soil microbiomes to high-severity wildfire: linking community assembly to functional potential
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