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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… are bacteria that act like tiny natural engineers with special skills to break down pollutants and recycle … Chloroflexota lost when they returned to an ocean home. A deeper understanding of how these bacteria evolved could … study published in  The ISME Journal     focused on a class within  Chloroflexota called  Dehalococcoidia . Some  …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… and University of California (UC), Merced. What started with 2 interns in the summer of 2014 has grown to a total of 75 with the inclusion of the 2023 cohort. Each of them has … has started a new position as the Senior Manager, Machine Learning at Pilot Flying J. Nathaniel Brown was a 2022 …
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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DOE Metrics
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… inside the host’s genome, living quietly and replicating with their host indefinitely. Now, in studying a microbial … the virus in 34 hosts or 26 percent of the single cells. Metagenomics sequencing then allowed the team to ask, for … strategy of lysogeny. The ability of the virus to tag along with the host has earned this strategy a riff, developed by …
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JGI@25: Solving the Mystery of the Missing Oil
… that will help solve energy and environmental challenges. Within days of the Deepwater Horizon oil rig explosion that dumped nearly five … Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed in several Lab …
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When “The Blob” Made It Hotter Under the Water
… that takes carbon from the atmosphere and keeps it in the deep ocean. With genomic samples collected before, during and after The … organic matter scavengers. This preliminary model aligns with several other studies on the potential effects of …
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A One-Stop Shop for Analyzing Algal Genomes
… is one of the largest data repositories of its kind, with an interactive browser that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, compare them, and … sprung up in almost all branches of eukaryotes (organisms with a nucleus). In part because of this evolutionary …
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A One-Stop Shop for Analyzing Algal Genomes
… is one of the largest data repositories of its kind, with an interactive browser that allows algal scientists and enthusiasts to look deep into more than 100 algal genomes, compare them, and … sprung up in almost all branches of eukaryotes (organisms with a nucleus). In part because of this evolutionary …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… from the University of Duisburg-Essen (UDE), Germany with the aim of intensifying collaborations in the fields of … in 2022, the delegation from UDE familiarized themselves with the research programs and user facilities at Berkeley … and systems biology, omics, and big data science, machine learning for experimental science, energy conversion and …
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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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Simon Roux
… approaches to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the … 11, 237 Roux et al., 2023. iPHoP: An integrated machine learning framework to maximize host prediction for … Giant virus diversity and host interactions through global metagenomics. Nature 578, 432–436. … DOE BER Early Career …
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