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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … food webs are microscopic photosynthesizing organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for ‘wanderer’). But they vary …
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A Collaboration to Improve Plant Genome Annotations Across Species
… works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … are generated through Community Science Program funding calls. JGI has research funding grants aimed specifically at …
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JGIota: Looking Back at Methane-Making Microbes
… We count on livestock for food and fiber, but raising these animals also produces …
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Charting Progress toward Professional Goals
… from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help inspire and train the … next generation of STEM professionals. Students can apply for internships and work onsite with an experienced … like, the background, like, “what these things are specifically” and “how they relate to other different things” that …
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Crops as Tough as World Cup Turf
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… the 2023 Highly Cited Researchers from the JGI recognized for their “significant influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … worked together on the development of a new software tool called geNomad that identifies and classifies mobile genetic …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … challenges, characterizing viruses is a key step. For decades, though, many viruses have been somewhat … easier access to these viral genomes. The new database was called IMG/VR. It featured samples from different ecosystems …
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SPRUCE-ing Up Science
… A former JGI intern is now applying his internship lessons on … his backyard in Tennessee — the birds are chirping and a soft breeze ripples through the trees in his backyard. … the program . “There was a lot of freedom to explore,” he recalled. His project involved developing an algorithm and …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of mystery genes and lay a future-ready foundation     Over … in perspective, the genus Aspergillus has been evolving for 82 million years, making it nearly 30 times older than … and analytical. How can the research community systematically sample an ancient, hyperdiverse kingdom while …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of … Walnut Creek, after countless generations of sequencing platforms (up to 120 sequencing machines at maximum) maintained by a workforce that numbered more than 100 at its peak, all the …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, … metabolites and associated genes are great resources for bioremediation, new agricultural applications or … distant cousin. Ceratopteris richardii, or C-fern, specifically has been studied in plant research laboratories and …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is committed to … Genome Project (HGP), and building upon the principles for open access in the field of genomics established in  Bermuda (1996-1997) and reinforced by the  Fort Lauderdale Agreement (2003), the JGI …
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