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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected … Society for Microbiology (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and … management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and impactful …
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PhycoCosm Tutorial
… analysis tools developed by the Joint Genome Institute (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, …
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Year in Review: JGI’s 2018 Progress Report Available Now
The latest edition of the JGI Progress Report highlights notable research and … lake east of California’s Yosemite National Park, taken by JGI’s own Jon Bertsch. Microbes isolated from Mono Lake were … Reports. Print copies will be available the annual JGI Genomics of Energy & Environment Meeting in San Francisco …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… discussions, workshops, and informal networking events. JGI will present both a genome center talk and a tech talk. Stop by the JGI booth to learn about our user programs and how we can help advance your science. …
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The More the Merrier: Making the Case for Plant Pan-genomes
Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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A Step Toward Controlling Soybean Rust
As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien Duplessis of the … of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at Lawrence Berkeley National … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … sequenced their RNA transcripts. All sequencing was done through the JGI Community Science Program . Using an ecology …
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MGM Workshop at Fisabio Summer School
June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is addressed to students and … professionals of biology, biomedical research, the health sciences and related fields who are interested in learning …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … send their samples in from afar, without ever hearing much about the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are …
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Logos and Templates
The JGI Style Guide offers tips on JGI logo usage - please follow these guidelines. Logos JGI logo – stacked JGI logo – horizontal JGI logo – indicia …
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Hiroshi Otani
… of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, metabolism and … in understanding how, when and why microbes decide to produce which metabolites. … BS, Engineering, Tokyo Institute of … CouR, a MarR family transcriptional regulator, is modulated through a novel mechanism. Nucleic Acids Res. 44, 595-607. …
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Daniel Udwary
Dr. Udwary serves as a computational biologist for JGI’s Secondary Metabolites group. His research interests … lie in use and development of bioinformatics tools for elucidation of biosynthetic gene clusters in bacteria and … chat"-style podcast about natural products and the science and scientists of secondary metabolism. … PhD in …
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