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The Integrated Microbial Genome Resource of Analysis
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Uncovering the dominant role of root metabolism in shaping rhizosphere metabolome under drought in tropical rainforest plants
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Science Programs
The JGI’s Science Programs offer support to users and their research efforts.  JGI scientists lend their expertise to enhance the … for them. Their concerted efforts help maximize the JGI’s impact in advancing both user science and the DOE …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… is an Assistant Professor at Binghamton University in New York. He and Rokhsar have  recently published a Nature … Session and Rokhsar, building on work with former JGI postdoc Jarrod Chapman, developed a method to correctly identify polyploid subgenomes without needing to know the genomes of their …
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New Microviridae isolated from Sulfitobacter reveals two cosmopolitan subfamilies of single-stranded DNA phages infecting marine and terrestrial Alphaproteobacteria
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Trent Northen
… the ENIGMA SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic … Northen’s research is focused on using metabolomics to link genomes with environments to understand how webs of microbes … survey of Populus across genotypes and environments. 2024 Nature Sci Data. 11, 339. …
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THE Bioenergy Tree
… hear from Oak Ridge National Laboratory scientists who have uncovered remarkable genetic secrets that bring us closer to …
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A 34K SNP genotyping array for Populus trichocarpa: Design, application to the study of natural populations and transferability to other Populus species
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Natural Variation in Lignin and Pectin Biosynthesis-Related Genes in Switchgrass (Panicum virgatum L.) and Association of SNP Variants with Dry Matter Traits
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Altered Expression of Two Small Secreted Proteins (ssp4 and ssp6) Affects the Degradation of a Natural Lignocellulosic Substrate by Pleurotus ostreatus
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… are abundant and yet exceptionally small, with mini genomes to match. As a result, they cannot process all of … are difficult to study in the lab. Metagenomics provides new views of these relationships.  Recently , researchers … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Sequencing Technologies
… sequencing to enable biological discovery by the JGI and external DOE users. Adopting the latest  sequencing technologies has allowed the JGI to increase sequencing output while significantly … hand with the Project Management Office to help ensure the JGI’s genomic capabilities are ready and applicable to …
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