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Triggering Morel Fruiting
A collaborative team led by Hao Tan from the Sichuan Academy of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… researchers have found that there is a striking division of labor between the two groups. Fungi are much more active in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory, to create the database. JGI …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected … and plasmid workflows for the National Microbiome Data Collaborative.  This award recognizes distinguished research … (VEGA) Symposium , which will take place later this year in Berkeley, Calif. Convening the “viral ecogenomics” …
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Metagenome-Assembled Genomes for “Candidatus Phormidium sp. Strain AB48” and Co-occurring Microorganisms from an Industrial Photobioreactor Environment
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Gotta Catch 'Em Gall
Kasey Markel and Patrick Shih (UC Berkeley and the Joint BioEnergy Institute) are looking for … how this project unfolded, and how they worked with the JGI's metabolomics program to find out more about these …
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Expanding Virophage Diversity
… the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the … approaches. By mining more than 14,000 publicly available metagenomic datasets in JGI’s  Integrated Microbial … a DOE Office of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing …
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Chomping Toward Better Plastic Recycling
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first sampled the area in summer 2016.  She described the microbial diversity patterns of Puerto Nuevo’s coastal waters and sediment with collaborators at the Center for Scientific Research and Higher …
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … approaches to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and … targets of hypermutation in the global microbiome. Nature Communications 12, 3076. Roux et al., 2018. Minimum …
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What Happens To a Rainforest When You Dial Up Drought?
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Crops as Tough as World Cup Turf
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