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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… and characterized a novel phylum-level lineage of archaea with at least two major subgroups dubbed Marsarchaeota. The … lineages found there and elsewhere provide researchers with insights into the evolution of life on Earth. For … State University has been conducting microbial field studies at Yellowstone, and in this latest report, published …
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VEGA Symposium
… of virus-host interactions and phage-based technologies for microbiome manipulation, the VEGA symposium represents a … in the viral ecogenomics field to exchange ideas with experts in the field, as well as with peers from other institutions. …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species decompose … Grigoriev, Fungal Genomics Program Head at the JGI.  Along with an improved understanding of multiple forest systems, … different soil communities for taxonomic diversity. These studies could pinpoint populations, but they said little …
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Pinning Down a Piece of Photosynthesis
… pin down.  Photosynthesis appears to have a lot in common with a Rube Goldberg machine: surprising dependencies, … on this structure, Grosjean and Blaby-Haas collaborated with a range of researchers across the Albert Einstein … has some amazing resources and people — not just the instrumentation — but the experts we were able to work with on …
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Cultivating Symbiotic Antarctic Microbes
… of soil-sediment environments, water and air-atmosphere with the humans and the biosphere), including the global … genome sizes and their cells were not observed to associate with host cells. In the  Proceedings of the National Academy … Rick Cavicchioli at the University of New South Wales along with researchers at the U.S. Department of Energy (DOE) …
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DAP-seq Drives Robust Mapping of Gene Regulation
… limitations and the sheer complexity of plant genomes. Now, with improvements to DNA Affinity Purification Sequencing … samples in a single experiment — and integrated these data with single-cell gene expression maps. Together, the scale … Currently, this technology is available to JGI users for studies on organisms with smaller genomes, such as bacteria …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… from the University of Duisburg-Essen (UDE), Germany with the aim of intensifying collaborations in the fields of … latest advancements in imaging-related technology and instrument-analytical methods.  “The microfluidic devices we … are excited to continue our fruitful collaboration in the microbiome space that has resulted in many impactful papers …
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Simon Roux
… approaches to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the … host dynamics in a high-altitude watershed soil ecosystem. Microbiome 11, 237 Roux et al., 2023. iPHoP: An integrated … cycle in wild populations of green sulfur bacteria with long standing virus-host interactions. The ISME Journal …
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Rex Malmstrom
… in situ functional activities of specific microbial groups within complex communities.  The Microscale Applications … and enable processing of samples that would not be possible with traditional approaches. … Volland et al. 2022.   A centimeter-long bacterium with DNA contained in metabolically active, membrane-bound …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… design and synthesis superpower. Through a series of case studies, JGI scientific users share how they’ve worked with the JGI DNA Synthesis Science Program, which started in … “The JGI DNA Synthesis Science Program has been instrumental in establishing larger-scale research projects in …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… inside the host’s genome, living quietly and replicating with their host indefinitely. Now, in studying a microbial … strategy of lysogeny. The ability of the virus to tag along with the host has earned this strategy a riff, developed by … suggest viruses are indeed piggybacking their hosts. Though studies in marine environments have detected viruses …
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Scaling Up Existing Skill Sets
… Merced Genomics Internship paired six UC Merced students with seven JGI researchers for bioinformatics internship … Comparative Analysis What effect has your summer internship with the JGI had on your plans to pursue a STEM career?
 … Functional Genomics What effect has your summer internship with the JGI had on your plans to pursue a STEM career? I …
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