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In depth metagenomic analysis in contrasting oil wells reveals syntrophic bacterial and archaeal associations for oil biodegradation in petroleum reservoirs
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Position-Specific Metabolic Probing and Metagenomics of Microbial Communities Reveal Conserved Central Carbon Metabolic Network Activities at High Temperatures
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Decomposing a San Francisco estuary microbiome using long-read metagenomics reveals species- and strain-level dominance from picoeukaryotes to viruses
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JGI-KBase Panel at SACNAS
Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific contribution? This session will …
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JGI Early Career Researchers Featured in mSystems Special Issue
In one article, Micro-Scale Applications head Rex Malmstrom and Metagenome Program head Emiley Eloe-Fadrosh outline more … sorting (FACS) to sort cells into several small pools before sequencing to recover rare microbes. The technique was … Environmental Genomics group, makes a pitch for readers to get involved in the developing field of virus …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
As warm-adapted microbes edge polewards, they’d oust resident tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And … ocean. Instead, they sharply delineated into two big geographical groups: those in colder, polar waters, and those …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to … relevant to living on a changing planet. Transcript for Audio Two special days occur in April: the 50th … there’s been a major restoration effort. So I had a PhD student named Brian Wolff. He was looking at the invertebrate …
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A Community Resource for Secondary Metabolite Researchers
… shared by most living creatures for energy, growth and reproduction—most organisms produce a set of "secondary … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … years several secondary metabolites databases have been made available to the research community, each offering …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… with C. richardii The Science Fern genomes are huge, and incredibly complex — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology … metabolites and associated genes are great resources for bioremediation, new agricultural applications or …
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific uncultivated … samples. The Science A team led by researchers at the Max Planck Institute (MPI) for Marine Microbiology has developed, tested and deployed a pipeline to first target …
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Metagenomic and Metatranscriptomic Analyses Reveal the Structure and Dynamics of a Dechlorinating Community Containing Dehalococcoides mccartyi and Corrinoid-Providing Microorganisms under Cobalamin-Limited Conditions
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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