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New Research Sheds Light on Diversity in the Deep Sea

… Microbial communities living near hydrothermal deep-sea … studied. The datasets are available on the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) portal. The study, published … This work was funded by the US-National Science Foundation grants OCE-0728391, OCE-0937404, OCE-1558795 to A-L.R, and …

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Metagenomic analysis of the ET‐743 producer

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A Guide to Gene‐Centric Analysis Using TreeSAPP

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NAP: The Network Analysis Profiler, a web tool for easier topological analysis and comparison of medium-scale biological networks

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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection

… long-read DNA sequences to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research projects. More … weight DNA) is an important factor as well for PacBio metagenomes. Q: How many PacBio metagenomes can I submit? How … characterization and cleanup. The JGI provides integrated high-throughput sequencing and computational …

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MAGI: A Method for Metabolite Annotation and Gene Integration

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TRIMER: Transcription Regulation Integrated with Metabolic Regulation

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Time‐series metatranscriptomes reveal conserved patterns between phototrophic and heterotrophic microbes in diverse freshwater systems

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KARRIKIN INSENSITIVE2 regulates leaf development, root system architecture and arbuscular‐mycorrhizal symbiosis in Brachypodium distachyon

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Spacer2PAM: A computational framework to guide experimental determination of functional CRISPR-Cas system PAM sequences

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Optimized CRISPR Interference System for Investigating Pseudomonas alloputida Genes Involved in Rhizosphere Microbiome Assembly