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Products
… The JGI has diverse capabilities in: DNA and RNA sequencing, Sample and library preparation, Biodesign and pathway engineering … Mass spectrometry based metabolomics Below is a table of standard product offerings, including a description of … clones if low number of variants, or pool of variants with sample sequencing to predict the number of successful …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… This is excerpted from the full announcement “ Berkeley Lab Receives Multiple 2021 HPCwire … Choice Awards . NERSC, JGI, ESnet are U.S. Department of Energy Office of Science user facilities. The HPCwire … multi-terabyte datasets assembled for the first time with  MetaHipMer , taking advantage of scalable parallel …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… on cone snails, UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first … patterns of Puerto Nuevo’s coastal waters and sediment with collaborators at the Center for Scientific Research and …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Researchers looked across many organisms to see that aminotransferase enzymes have … National Laboratory (Berkeley Lab). He completed this work with collaborators at the University of Wisconsin-Madison as … and eukaryotes having slightly larger numbers due to their expanded metabolisms. These ATs can operate in a relatively …
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Enlarging Windows into Understanding Gene Functions
… affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a dizzying array of … workflow that reduces the time and cost associated with this purification step, and Baumgart continued and expanded on the work known as biotin DAP-seq after she left …
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version … under active development for over 5 years, provides users with the genome browsers, gene pages, search, BLAST and … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… cell is key to interrogating what genes do, how they work, and applying them to environmental and energy challenges. … case studies, JGI scientific users share how they’ve worked with the JGI DNA Synthesis Science Program, which started in … more than 10 papers, including two Nature Plants publications, in five years, have come out of the …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … challenges. Chlamydomonas is a single-celled alga with a unique place in evolutionary history. Retaining … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference …
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Integrating Experimentation with Data
…  Students: $200      Postdocs: $250     Industry: $700    Thanks for joining the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) … Automated Laboratories: Integrating Experimentation with Data” was held at the Seattle Marriott Waterfront in …
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10 From JGI on the 2019 Highly Cited Researchers List
… Clarivate Analytics, formerly the IP & Science arm of Thomson Reuters, … of Highly Cited Researchers , which includes 10 affiliated with the JGI . The 2019 list focused on Highly Cited Papers, … (GSC), and the International Committee on Taxonomy of Viruses to outline the minimum amount of information for an …
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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. The … (MPI) for Terrestrial Microbiology and the University of Bordeaux have developed a platform that mimics chloroplast function within a cell-sized system. The Impact Photosynthesis …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… they’d oust resident tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … displacing these important cold-water communities of algae with warm-adapted ones, a trend that threatens to … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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