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Streamlining Regulon Identification in Bacteria
… up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … regulation as well as identification of target genes of transcription factors, particularly sigma factors …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… a method to correctly identify polyploid subgenomes without needing to know the genomes of their ancestors. The … you evolved from’,” he said. “This approach could work if genes from all possible candidate ancestors are available. …
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Evolution of a multi‐step phosphorelay signal transduction system in Ensifer: recruitment of the sigma factor RpoN and a novel enhancer‐binding protein triggers acid‐activated gene expression
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A Synthetic Gene Library Yields a Previously Unknown Glycoside Phosphorylase That Degrades and Assembles Poly-β-1,3-GlcNAc, Completing the Suite of β‑Linked GlcNAc Polysaccharides
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… loss of cell walls and a complex pattern of evolution for genes related to eating plant compounds in both the oceanic … diverse  Chloroflexota show the ability to respire with or without oxygen, fix nitrogen, and break down organic and …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… Journal publication caps JGI pilot project with fledgling Florida … able to tell the students that the paper was accepted for publication in a reputable scientific journal. It was …
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Decoding Yellowstone’s Microbial Mats
… Life as we know it wouldn’t exist without cyanobacteria; they began oxygenating Earth over two …
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Georg Rath
… built by his team is unbureaucratic and driven by code, without putting humans in the loop. He is a big proponent of …
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Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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Genomic analysis of 94 SEMIA strains isolated from common bean nodules: species diversity and genes related to nodulation, nitrogen fixation, and tryptophan metabolism
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Gut Fungi: Unexpected Source of Novel Chemicals
… in their hunt for anaerobic fungi. By growing extracts without oxygen in ruminant fluid — which smells terrible … products. The team then confirmed that these expressed genes translated into expected proteins. That work was done …
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