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JGI User Executive Committee Expands
On the UEC she intends to represent the user community by providing input on JGI policies and capabilities that affect … genetics expertise and experience as a primarily fungal genomics user, he aims to help align JGI policies with … also interested in developing or improving bioinformatics tools that can help with dataset analysis, as well as how …
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Microbial Genomics & Metagenomics (MGM) Workshop
… has closed.  The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This highly hands-on …
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Frederik Schulz
… sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and … for terrestrial protists. These approaches enable novel insights into the diversity and important ecological roles … academic achievements (2008) … Education … Selected Publications … Awards and Service …
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Accelerating Metagenomics Discoveries with Deep Learning
… in an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data … are utilizing deep learning to automatically generate insights from metagenomic data. In deep learning, a branch … Resources Division (CRD), in order to create more useful tools for the bioinformatics community. Other work presented …
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Rice SNP-seek database update: new SNPs, indels, and queries
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Comparative Genomics of a Plant-Pathogenic Fungus, Pyrenophora tritici-repentis, Reveals Transduplication and the Impact of Repeat Elements on Pathogenicity and Population Divergence
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Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize
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Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… nutrient. The Impact This study is the first to dig into a forest floor ecosystem to discover what carbon- and … to which microbes they belong. This study provides further insights into the microbial involvement in carbon and … database on the denizens in the soil. While large protein databases, like UniProt, exist, are not specific enough for …
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The Sphagnome Project: enabling ecological and evolutionary insights through a genus‐level sequencing project
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Insights into Secondary Metabolism from a Global Analysis of Prokaryotic Biosynthetic Gene Clusters
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A metagenomic insight into freshwater methane-utilizing communities and evidence for cooperation between the Methylococcaceae and the Methylophilaceae
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