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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and … on the full composition of genes, or pangenome, of the model plant  Marchantia polymorpha. Commonly known as liverwort, this was done to gain insights into gene … This project received funding from the European Research Council under the European Union’s Horizon 2020 …
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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science … to harness the power of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and … group. His research focus includes engineering of non-model yeasts for production of biofuels and renewable …
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Eelgrass Proves to Be Much Younger Than We Thought
… Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the … most abundant plants in the ocean, originated in Japan before spreading around the globe. Now, scientists have shed … This study was supported by a PhD scholarship from the China Scholarship …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 Annual Meeting . The meeting was a hybrid event, with guests … Nobel Laureate Jennifer Doudna of the University of California, Berkeley and Berkeley Lab, who discussed the …
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Silver age of GOLD introduces new features
… The JGI’s Genomes OnLine Database celebrates 25 years as a vital resource for data … making curated microbiome metadata that follows community standards freely available, and enabling large-scale … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …
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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Across four forests, researchers have leveraged data from the 1000 … to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not … to tree health and carbon storage — skills that matter increasingly as the climate warms. However, these are complicated …
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A User-Centered Approach to Accessing JGI Data
… the JGI Data Portal (https://data.jgi.doe.gov/) launched last year, it was only accessible through the plant portal  Phytozome . Now the portal offers a way for … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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Supercharging SIP in the Fungal Hyphosphere
… probing helps ID novel interactions between bacteria and fungi The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial communities, with results published … Work at Lawrence Livermore National Laboratory was conducted under the auspices of the U.S. DOE under …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re … relevant to living on a changing planet. Transcript for Audio Two special days occur in April: the 50th … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s …
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How to Target a Microbial Needle within a Community Haystack
… samples. The Science A team led by researchers at the Max Planck Institute (MPI) for Marine Microbiology has developed, tested and deployed a pipeline to first target … Development of this protocol was enabled by the JGI’s  Emerging Technologies Opportunity Program . The ETOP helps …
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… Congratulations to Susannah Tringe , one of eight scientists and engineers who … , one of DOE’s highest honors! Tringe, a microbiologist, was recognized for “advances in sequence-based studies of microbial …
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