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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and … and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. They can be found … approach. The tool was employed to build version 4 of the JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 …
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How Microbes Can Protect Plants in Drier Straits
New Investigator proposal was recently approved through the JGI Community Science Program, to use microbiome science to …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses …
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A Powerful Technique to Study Microbes, Now Easier
Lawrence Livermore National Lab biologist Jennifer Pett-Ridge collaborated with JGI scientists on an ambitious project: to bring in robots … that measure microbial activity in soil. Now, the researchers and robots have made these experiments easier …
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Learning to Look
… expands inovirus diversity. To answer the question, “Where’s Waldo?” readers need to look for a number of … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, developed an … and extrusion, and DNA replication and integration. The researchers also learned how an inovirus’ strategy of …
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Hiroshi Otani
Genome Institute in 2016, Dr. Otani has been studying secondary metabolism in microbes, particularly actinomycetes. … of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, metabolism and … trove of microbial natural products. Nat Rev Microbiol. 2021 Nov;19(11):683. Mouncey NJ, Otani H, Udwary D, …
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JGIota: Looking Back at Methane-Making Microbes
We count on livestock for food and fiber, but raising these animals … and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those microbial methane-makers. …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help or harm plant host health. The Science Researchers compared the genomes of fungi that colonize … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
A group led by JGI scientists have made strides in improving and applying a method that allows researchers to quickly modify diverse bacterial genomes. In … team  announced in  Nature Microbiology an important addition to the synthetic biologist’s toolkit: a technique for  c …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … what biochemical processes? Now, an international team of researchers has identified the major metabolic roles of … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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SIPs with Standards
… catch: SIP labwork and analysis can be very demanding.  The JGI offers SIP analysis to make these experiments accessible to more researchers. Ultimately, the goal is to generate SIP data … multiple teams and analyses. This episode, Rex Malmstrom (JGI), and Roli Wilhelm (Purdue University), share a few …
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility located at … produced in engineered viruses or microbial cells. Researchers could then use these proteins to recognize …
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