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The Fungi That Survive In Antarctica
Black fungi are microscopic and mighty. They survive everywhere from Antarctica to Joshua Tree National Park, despite … Tuscia researchers Laura Selbmann and Claudia Coleine are working with scientists from around the world – and the JGI – to understand them better. …
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2023 Progress Report
U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, large-scale data, and professional expertise to support the global research community in studies of complex biological and environmental systems. We optimize our service to the community through responsibly …
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Refining the Process of Identifying Algae Biotechnology Candidates
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … sequence and then analyze the genomes and multi-omics datasets for algae that can be used for large-scale production … bioproducts. At NREL, Luke Dahlin in Michael Guarnieri’s group led the effort to screen 107 algal strains, growing them …
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Frederik Schulz
… the DOE Joint Genome Institute in 2016 and is leading the New Lineages of Life Group. His research is focussed on the discovery of novel … and biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the …
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Better Living Through Bioenergy
Biofuels and bioproducts are a way to kick our addiction to fossil fuels. In this episode, we peek into how scientists Aindrila Mukhopadhyay and Steve … research at the Joint BioEnergy Institute (JBEI) , a JGI partner and one of the four US Department of Energy …
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Microbial Genomics & Metagenomics (MGM) Workshop
The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics and Metagenomics. Details: mgm.jgi.doe.gov   This highly hands-on workshop is designed to …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
Back in 2011, JGI-supported researchers published a paper in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… subsurface ecosystems. A team of researchers described how the viruses repeatedly attempted to infect and destroy the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in the samples that corresponded to eight separate groups of viruses. To visualize one particular viral genome in …
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You Can Move, But You Can’t Hide
Researchers at the JGI develop a tool to quickly and accurately identify mobile … called geNomad identifies and classifies MGEs based upon their gene content and their genetic sequences. The … of new viruses and plasmids quickly, even in massive datasets. geNomad employs two distinct approaches to identify …
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Finding the Fermenters
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Research (BER) program to enable scientific discovery in support of the DOE mission. Fermentative metabolism occurs in … Fermentation Explorer ( GitHub ) with a series of large datasets. One test was to predict traits of more than 400 …
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How Maize Makes An Antibiotic Cocktail
… that protects it against infections — using surprisingly few enzymes. The Science Maize ( Zea mays ) produces a … called terpenoids, which have a structure belonging to a group of chemicals called terpenes. Terpenes are important in … as  Sorghum bicolor — a  candidate bioenergy feedstock and  JGI Flagship Plant — could produce at least 15 zealexins. …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… female gametes in one individual. But some, including shrub willow  Salix purpurea , employ the evolutionary strategy we … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … two species and, perhaps, more generally. … This work was supported by the NSF Dimensions of Biodiversity Program …
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