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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… crop and ornamental seeds sold for the upper Midwest are often very different than those bred for Texas. Identifying … As  reported January 27, 2021 in  Nature , the team led by researchers at the University of Texas (UT) at Austin, the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of large and giant viruses. While the microbes in a single … study  published in the journal  Nature , a team led by researchers at the U.S. Department of Energy (DOE) Joint …
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Protocols
Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here . DNA Extraction …
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Leadership
… strategic planning, talent management, and convening of advisory committees to guide the direction of programs and initiatives to enhance the JGI’s preeminence as a national resource. Members report to the JGI Director. …
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Applying Viral Genomics Expertise to Understanding the Human Virome
JGI researchers lend expertise to develop tools and data hub for … viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome … computational methods and analyses developed for JGI-enabled research involving environmental samples to help …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … that came with crayons in various shades of white. To researchers searching for sequences of RNA viruses in large … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and gene expression. Sailing from pole to pole on four research cruises, they dipped their self-closing containers …
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Honey Bee Gut Microbiota Divvy Up Dinner
… what biochemical processes? Now, an international team of researchers has identified the major metabolic roles of … all the energy they can. The results in the study were enabled by a number of  in vitro and  in vivo experiments, … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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User Executive Committee
The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their science including technical capabilities offered, proposal review procedures and the annual user …
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Project Management Office
The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works with users, JGI scientists and technical staff to onboard users and …
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Identifying the Microbial Cleanup Crew at a Superfund Site
PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a local dry-cleaner. Researchers  identified two bacteria,  Dehalococcoides … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Computationally Classifying Fungal Lifestyles
… classify gene families. The Science As a proof of concept, researchers developed an algorithm that “taught” a computer … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … in the June issue of  Studies in Mycology . This work was enabled in part through  JGI’s  Community Science Program …
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