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The IMG/M data management and analysis system v.6.0: new tools and advanced capabilities
Learn more
Twenty-five years of Genomes OnLine Database (GOLD): data updates and new features in v.9.
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The Science … a genus of just under 400 mosses that can carry up to 25 times their dry weight in water, makes up the … sequenced sphagnum  genomes from plants selected by a team from Duke University, then tested for heat and pH …
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Better Genome Editing for Bioenergy
… is a powerful, high-throughput gene-editing tool that can help scientists engineer organisms for bioenergy … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica … to be required for growth. By contrast, an initial screen using an unvetted library (with both active and inactive …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… fungi of Chytridiomycota (the “chytrids”).  A collaborative team led by Joey Spatafora at Oregon State University, … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the … were then sent to the JGI for whole genome sequencing using the Illumina platform. Unfortunately, both the DNA and …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… more broadly, land plant evolution. Recent findings in Ceratopteris richardii show a long history of dynamic evolution … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … could not explain the massive size of most fern genomes. A team of researchers put together a chromosomal genome …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… In this short video, UC Merced undergraduate and graduate students share how their summer internship … Hear more about what they learned from working with their JGI mentors, what challenges they overcame, and what new … me, previously I had I don’t know how to communicate with team members previously. I think I may keep doing research, …
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Nick Everson
… Mr. Everson rejoined the JGI in 2020  and leads all aspects of JGI Operations which include the Safety, Finance, Human Resources, Facilities, IT, Shipping and Receiving, Lab Automation, and Administration departments. He previously … Deputy of Operations provides oversight and leadership of JGI operations infrastructure, including space and …
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An Addiction Crucial to a Fungus’ Reproduction
… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science … was a likely key to this evolutionary transition. Using this model, researchers also generated the first … and experimented with the fungi and bacteria, while the DOE JGI team sequenced and annotated a host genome (Rm ATCC …
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First Monoploid Reference Sequence of Sugarcane
… sequence. For the highly polyploid sugarcane, an international team of researchers has successfully assembled a … polyploid sugarcane genome now underway as part of the JGI Community Science Program (CSP), a critical factor in … The final sugarcane sequence generated is 382 Mb; 25,316 protein-coding gene models were predicted with more …
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Tracking the Origins of Methane-Producing Microbes
… Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the … lab had previously collaborated with the JGI on a proposal using this approach through the Emerging Technologies …
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The Expanding Universe of Methane Metabolisms in Archaea
… a key role in determining the composition of the Earth’s atmosphere and regulating the global climate for life to … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly … conditions, or it could couple the two metabolisms by using sulfite to oxidize methane and hydrogen. McKay …
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