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… reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science … for  biofuels and other bioproducts. Finally, understanding how brown rust disease resistance works in sugarcane could … a full representation of the diversity present in R570 but shows the genomic effects of breeding practices that …

… a DOE Office of Science User Facility,  reported on just how morel fruiting is triggered when nutrients are acquired … part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In … the fruiting of soil saprotrophic mushrooms. To date, how the nutritional acquisition of the morel mycelium is …

Genomics Capabilities Webinar inviting researchers to submit white papers to the Community Science Program’s  Functional Genomics call … proposals by a consortium. The consortium looked at how different bioenergy relevant plants can produce …

To provide broad plant genomic capabilities, the DOE Joint … experimentally derived biological roles to genes. Sarah:  How many plants did you all look at? Avinash: We started off … project. Sarah:  I assume you were not doing this alone. How many groups were you working with? Avinash: In the …

… chilly waters of Antarctica, tiny ocean-dwellers called phytoplankton play an outsize role in cycling carbon and … function and activity of phytoplankton genes and looking at how communities of these microalgae interact, researchers … analysis as well as laboratory culture experiments showed that those zinc-binding proteins are important for …

The JGI welcomes three new members to the JGI User Executive Committee (UEC) : Roland … nine other JGI users already serving on the UEC – go here to view the full roster of members. Each of the researchers … but use-restricted] exist on [the JGI data portal] IMG or how to deal with situations in which they inadvertently …

Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. … Changing an A, C, T or G in a genome sequence can lead to changes in protein structures and functions, but the DNA … or 5mC. In many organisms, 5mC is an important piece of how they regulate their genomes, but is not well understood …

… the DOE Joint Genome Institute in 2017 as the fourth Director in its 27-year history. He has a wealth of managerial experience from almost 20 years in the Industrial Biotechnology private sector, as well as research expertise in secondary metabolites …

… we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and … of C. reinhardtii became available, data mined by the JGI shows that those sequences have been cited in almost …

… and Alabama A&M University piloted an internship program to bring students to the JGI for research training experience. Enabled by the … CRISPR Cas9 knockout mutants to observe and investigate how transporter proteins regulate the production of root …

Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a … polymorpha. Commonly known as liverwort, this was done to gain insights into gene families involved in adaptations … mechanisms they had identified. For example, in comparing how liverwort and flowering plants had adapted to their …

… as well as target cycle times from sample receipt to completion of standard analysis.  Raw data is provided … below. In addition, JGI will submit raw sequence data to  SRA at NCBI once the standard analysis is complete. Raw metabolomics data is submitted to the  MassIVE repository . Not all products are available …