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Game On: High School Students Drive Everglades Metagenomics Study
… email request reached  Emiley Eloe-Fadrosh , the Metagenome Program Head at the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI) , a DOE Office of Science User … for the JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) portal for their sample analysis.  The class had to …
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JGI Workshop at SIMB NP Meeting
… a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a DOE Office of Science User …
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JGI Announces 2025 New Investigator Portfolio
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… cattails. In 2018, the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … email inquiries, sent through JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) system, reached  Emiley Eloe-Fadrosh , who heads the  …
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JGI & KBase at PAG XXVII
… The Plant and Animal Genome XXVII Conference (PAG) takes place January 12-16, … in San Diego, Calif. Representatives from the DOE Joint Genome Institute (JGI) and the  DOE Systems Biology … Genomic Science Workshop Agenda: 6:20 PM Overview and Joint Genome Institute Plant Program Update 6:33 PM Comparative …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who also holds a joint … because in many plants chromosomes are present in more than two copies, a condition known as polyploidy. The multiple … copies arise from past genome duplication, which occurs in two basic ways. In “autopolyploids”, genome duplication …
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Dan Rokhsar
… human chromosomes. After successful completion of the Human Genome Project, Professor Dr. Rokhsar ’s team has continued … and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the Eukaryotic Genome Program (2010-2019), and JGI Chief Informatics …
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First Monoploid Reference Sequence of Sugarcane
… Sorghum genome serves as a reference for the highly complex … genome . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, … sequencing programs generally focus on a genotype with two identical sets of chromosomes to produce a monoploid …
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Work With the JGI! Tips for a Winning CSP Proposal
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A Plant Root Atlas for Tracking Developmental Trajectories
… scientist at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Cole, have been leading these efforts, which included two  workshops with resulting reports and a  perspective … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
…   Visualizing a novel, candidate viral genome found in the deep subsurface ecosystem. The Science … of countering multiple attempts at virus infections. Their genomes include short DNA sequences that code for CRISPR … researchers surveyed publicly available data in the JGI’s  IMG/M database , information the Probst lab used to search …
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Tanja Woyke Elected to American Academy of Microbiology
… genetic material of uncultivated microbes and link their genomes to the roles they play in the environment. One … in Nature , applied single-cell sequencing to decode genomes of bacteria and archaea from previously understudied … of energy and environmental genomics.” Along with Woyke, two JGI users were also elected to the AAM: fungal …
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