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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold … majority of the ground cover in peatlands. These boggy ecosystems are acidic and have very little oxygen, which is … return to the atmosphere. Peat bogs also serve the ecosystem by minimizing flood risks and filtering water. Peat …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… microbial metabolism affects the biogeochemical cycling of carbon, nitrogen, and other elements, better understanding … relied on methods that eschew culturing, painting a more systematic picture through single-cell and metagenomic … the virus had been infecting the cell. The team assembled 130 genomes from their sample — a small proportion of the …
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JGI Announces 2026 Functional Genomics Recipients
… these functions gives researchers the tools to build engineering applications in support of advancing the … biological research to develop  applications ranging from engineering microbial enzymes that unlock novel biochemical … edge experimental techniques for predictive modeling and bioengineering applications to advance U.S. energy independence …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
… to inspire more students to enter the science, technology, engineering, and mathematics (STEM) workforce. In doing so, …
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JGI Workshops at PAG
… it to the attention of the wider genomics community. Jan. 13 workshop: BER Plant Genomic Science In this workshop, we … sequence information to BER funded activities of plant systems. We will describe how to apply for a project with … JGI Community Science Program and how you can use the KBase system to accelerate your plant genomics research. …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… resulting from 95 letters of intent. For the first time, 63 percent of the accepted proposals come from investigators … plans to analyze and distribute data through the  DOE Systems Knowledgebase (KBase) , a free, open source data … also approved to learn more about the roles of diatoms in carbon fixation and in aquatic food webs. Finally,  …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) system. “We then looked into many more samples and refined … of sequences, and soon, with trillions. The development of efficient, automated approaches to analyze and classify … sequencing and computational analysis that enable systems-based scientific approaches to these challenges.  …
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Four Researchers Join JGI User Executive Committee
… community to study complex biological and environmental systems. The foundational studies enabled contribute to the … functional encyclopedia building on GEBA) and in microbiome engineering.  Köpke is the Chief Innovation officer at … Schadt stepped into the UEC chair role effective March 3; Lizzy Wilbanks assumed the vice chair role while Kristen …
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The Mobilome in the Mire
… this mobilome into light, and opening up new options for engineering these microbes in the future. Join Sarah Bagby …
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Silver age of GOLD introduces new features
… scheme to better define the genomic information and ecosystems. These curated data are accessible on JGI data … the Integrated Microbial Genomes & Microbiomes (IMG/M) system, enhancing genome annotations and promoting … improvements include new features like a public API and ecosystem landing page, as well as the growth of different …
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Tanja Woyke Elected to American Academy of Microbiology
… Genomics Department Head for the Environmental Genomics and Systems Biology Division of the Lab’s Biosciences Area since … Lab honorees. Woyke’s research focuses on developing and harnessing single-cell methods to access the genetic … As a result, the giant virus protein space grew from 123,000 to over 900,000 proteins, and virus diversity in this …
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RECAP: Keynote Speakers Talk Innovation at 2022 JGI Annual Meeting
… on Earth,” Weizmann explained.   These algae take up carbon dioxide and emit oxygen and other gasses — some of … that you all know,” Vardi shared. Crucial for the global carbon cycle, photosynthetic phytoplankton do not operate … a better idea of how these tiny interactions shape  carbon cycling in the ocean.   “So very interesting to think, how …
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