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Extensive gene content variation in the Brachypodium distachyon pan-genome correlates with population structure
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Glacier-preserved Tibetan Plateau viral community probably linked to warm–cold climate variations
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Allopolyploidy expanded gene content but not pangenomic variation in the hexaploid oilseed Camelina sativa
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Novel major loci shape habitat‐associated flowering time variation in Yellowstone monkeyflowers
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently … one of which is sweet sorghum Rio from a JGI Community Science Program project and another is Lupinus albus from a …
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Emiley Eloe-Fadrosh
… Dr. Eloe-Fadrosh joined the JGI in 2014 to pursue her research interests in microbial … in human microbiome research at the Institute for Genome Sciences at the University of Maryland School of Medicine … Program Lead position in 2017. She also leads the DOE’s multi-lab National Microbiome Data Collaborative …
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Genome-Wide Association Studies across Environmental and Genetic Contexts Reveal Complex Genetic Architecture of Symbiotic Extended Phenotypes
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iPHoP: A Matchmaker for Phages and their Hosts
… computation helps fill in what cultivation can’t. The Science At first, viruses are merely toolkits. To do … be a specific host the virus has adapted to commandeer. For bacteriophage viruses, these hosts are microbes like … at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley …
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Tanja Woyke
… Dr. Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her … of User Program position in 2021. In addition to her JGI appointment, she also holds an Adjunct Scientist appointment at the Bigelow Laboratory for Ocean Sciences since 2012 and an Adjunct Professor at the …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… changed dramatically over the last  25-plus years since the JGI’s inception, making it possible for researchers to get a … this “ data tsunami ,” as Kathy Yelick of the Computing Sciences Area at Lawrence Berkeley National Laboratory … — worked to offer researchers high-powered tools for large-scale assembly and analysis.   To put these efforts …
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Viruses Reprogram Cells into Different Virocells
… infected by viruses undergo metabolic reprogramming. The Science If it looks like a duck and quacks like a duck, so … science initiative between the  U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Genetic determinants of endophytism in the Arabidopsis root mycobiome
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