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A SNP resource for Douglas-fir: de novotranscriptome assembly and SNP detection and validation
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De novo Nanopore read quality improvement using deep learning
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Hybrid error correction and de novo assembly of single-molecule sequencing reads
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Assemblathon 1: A competitive assessment of de novo short read assembly methods
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Comparing polysaccharide decomposition between the type strains Gramella echinicola KMM 6050T (DSM 19838T) and Gramella portivictoriae UST040801-001T (DSM 23547T), and emended description of Gramella echinicola Nedashkovskaya et al. 2005 emend. Shahina et
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Better Genome Editing for Bioenergy
Moreover, the team says the approach they used to validate their set of guide RNAs could be applied to other … felling their research problem: at a genetic level, how does  Y. lipolytica work? The project was a … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica …
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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JGIota: Looking Back at Methane-Making Microbes
… and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those microbial … methane-makers. Eventually, that could help us dial back their emissions, while still producing things like meat, milk, and wool. Hear more from JGI collaborators Sinead Leahy (New Zealand Agricultural …
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How to Target a Microbial Needle within a Community Haystack
… microbes, and then efficiently retrieve and characterize their genomes. The Impact Despite great strides in … worked with researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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FinisherSC: a repeat-aware tool for upgrading de novo assembly using long reads
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How Much Do rRNA Gene Surveys Underestimate Extant Bacterial Diversity?
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Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
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