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Cultivating Symbiotic Antarctic Microbes
Nanohaloarchaeota cultures reveal they are symbionts and not … in the Antarctic lakes and offers a genetically-tractable model system that could help researchers better understand …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
As warm-adapted microbes edge polewards, they’d oust … properties,” said study coauthor Igor Grigoriev , JGI Fungal & Algal Program Head. “But still, there are no … melting away.” Driven by climate change The team used a model from the Intergovernmental Panel on Climate Change …
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DOE JGI Interns Share Their Summer Experiences
This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer … summer, they worked with Zhong Wang’s and Tanja Woyke’s groups, respectively. Each of the interns spoke briefly …
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Nigel Mouncey
Dr. Mouncey joined the DOE Joint Genome Institute in 2017 as the fourth Director in its 27-year history. He has a wealth of managerial experience from … serving as JGI Director, Dr. Mouncey leads his own science group at JGI focused on secondary metabolites. He is also on …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… 2022 marks the JGI’s 25th anniversary. Over the last year, we’ve been revisiting a … for anaerobic fungi . Eventually, it’s possible that fungal communities — or enzymes from fungal communities — …
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Janey Lee
Janey provides support for custom single-cell user projects and projects within the group. …
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Waiting to Respire
Genomes from uncultivated bacteria offers clues to ancestral bacteria’s energy sources. … fellow Paula Matheus Carnevali was working with a group of metagenome-assembled genomes (MAGs) dubbed …
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The More the Merrier: Making the Case for Plant Pan-genomes
Brachypodium model system traces polyploid genome evolution. Flowering plants abide by … Berkeley National Laboratory (Berkeley Lab), relied on a model grass system for answers. Their work  recently …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
As SIP experiments shed more light on microbial communities … said Rex Malmstrom, leader of the Microscale Applications group at the JGI, whose team uses a semi-automated, … high-quality datasets, enabling global insights from modeling, machine learning, and subsequent experiments.  … …
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Fishing for Novel Cellulose Degraders
A “bait and hook” single-cell genomic approach to … The team first tested the approach on bacterial laboratory models to set a reference for its performance, and then … caught several microbes from known cellulose-degrading groups, the researchers also hooked and were able to …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
Gardeners and farmers around the country recognize that crop varieties … copies across the chromosomes. “In the past, we needed model systems to test genetic hypotheses in species with … that has gone into this, people are going to be able to model further research on this complex species and also at …
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JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based high-performance … in 2019, only the JGI hackathon is particularly focused on developing bioinformatics applications instead of on …
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