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Benjamin Cole
… Dr. Cole is interested in studying how plants interact with their environment. Prior to joining the Joint Genome Institute, his focus was primarily on how plants interpret different light cues by altering their growth program, and on how plants coordinate their gene expression with light and …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… the evolutionary past may hold key insights. The way that plants process nutrients has a rich back story — they rely … work was our focus on all the kingdoms, including animals, plants, bacteria, archaea and fungi. We thought this kind of … from each of six kingdoms: eubacteria, archaea, protist, plant, fungi and animal. This analysis led them to identify …
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New Research Sheds Light on Diversity in the Deep Sea
… survive in very hot, high-pressure and chemically-rich ecosystems. This means they hold clues for understanding how … oceanic regions to better understand how these hydrothermal ecosystems function in such extreme conditions. They …
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Cataloging the Microbes that Manage the Health of River Systems
… develop predictive watershed scale models to manage river ecosystems. One application for the information is the … changes. Summary Rivers are key components of watershed ecosystems, where rain or snow drain into such bodies of …
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JGI announces 2024 New Investigator portfolio
… desert grasslands to the metabolic savviness of microbial ecosystems at the forest floor and along ocean shores. Their …
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An Addiction Crucial to a Fungus’ Reproduction
… endobacteria, the Rhizopus fungus cannot act as a plant pathogen, it cannot reproduce asexually, and … the host. Using the mutualistic relationship between the plant pathogenic fungus Rhizopus microsporus (Rm) and … Rm-Burkholderia relationship, Rhizopus is neither a plant pathogen nor able to reproduce with ease. So far, all …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… fundamental aspects of fern biology and, more broadly, land plant evolution. Recent findings in Ceratopteris richardii … ancient gene transfers from bacteria have all armed the plant with an array of defense mechanisms. The Impact There … will illuminate the evolutionary history of a pivotal plant as well as the evolution of seed plants, the fern’s …
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Open Frameworks Training the Next Generation of Scientists
… Science Foundation Integrative Organismal Systems - Plant Biotic Interactions 2029168 award. This material is …
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Genome Insider
… — and dives into their work on all kinds of organisms, from plants and fungi to microbes and viruses. Listen in to …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… pressure on retaining the flagellum in the terrestrial ecosystems. Unfortunately, neither paper was able to resolve … genetic material with various origins, ranging from fungi, plants to bacteria. Back in 2011 when these genome and … fungi predate the oldest known fossil record of land plants and evolved in early microbial biocrust environments. …
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Dan Rokhsar
… in the sequencing and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s … on understanding the origin, evolution, and diversity of plants and animals by combining computational genome … In addition to this evolutionary focus, his work on plant genomics is targeted towards the development of …
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Silver age of GOLD introduces new features
… scheme to better define the genomic information and ecosystems. These curated data are accessible on JGI data …
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