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The Fungi That Survive In Antarctica
… researchers Laura Selbmann and Claudia Coleine are working with scientists from around the world – and the JGI – to understand them better. …
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2023 Progress Report
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Better Genome Editing for Bioenergy
… at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica … of researchers sought to disrupt every gene in the genome with CRISPR-Cas9 in order to interrogate each one’s … to fix a defect in the approach: CRISPR-Cas9 relies on RNA with a short guiding sequence (20 bp) that directs the …
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Better Living Through Bioenergy
… research at the Joint BioEnergy Institute (JBEI) , a JGI partner and one of the four US Department of Energy …
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Microbial Genomics & Metagenomics (MGM) Workshop
The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is offering a five-day workshop on Microbial Genomics … highly hands-on workshop is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) … sequence data and enables the user to analyze these data with existing bioinformatic methods to bridge the gap from …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the …
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Toward More Efficient Artificial Photosynthesis
… have developed a platform that mimics chloroplast function within a cell-sized system. The Impact Photosynthesis … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … fixing enzyme in nature. The library provided the Erb lab with enzymes that led to a previously reported synthetic …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… students this past summer. This year’s cohort for the JGI-UC Merced Internship Program was brimming with excitement and determination as they came onsite. From … to science communications, their schedules were filled with trainings that they later reported were incredibly …
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Zhong Wang
… on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up … scientists and biostatisticians. Through collaborations with internal and external scientists, the Wang group has …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge National … — Summit and Frontier — that process terabytes of data with MetaHipMer2. And the National Energy Research … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …
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Extracting the Secrets of Secondary Metabolites
… payloads directly into diverse microbes. Combining CRAGE with CRISPR provides researchers with a powerful addition to their toolkit to study gene … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Streamlining Regulon Identification in Bacteria
… technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of … technology, which combines an in vitro transcription assay with RNA sequencing, they were able to identify the target … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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