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Linking soil biology and chemistry in biological soil crust using isolate exometabolomics

Improved Assemblies Using a Source-Agnostic Pipeline for MetaGenomic Assembly by Merging (MeGAMerge) of Contigs

Integration of phenotypic metadata and protein similarity in Archaea using a spectral bipartitioning approach

FinisherSC: a repeat-aware tool for upgrading de novo assembly using long reads

Marker-free carotenoid-enriched rice generated through targeted gene insertion using CRISPR-Cas9

Feature selection and causal analysis for microbiome studies in the presence of confounding using standardization

FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation.

Multiplex knockout of trichome-regulating MYB duplicates in hybrid poplar using a single gRNA.

Label-free structural imaging of plant roots and microbes using third-harmonic generation microscopy

2023 Progress Report

… Mission As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, …

Better Genome Editing for Bioenergy

… how does Y. lipolytica work? The project was a multi-institutional effort led by then-graduate student Cory … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica … of researchers sought to disrupt every gene in the genome with CRISPR-Cas9 in order to interrogate each one’s …

MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses

Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.