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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern

… program and current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution … in this publication during her summer internship in 2018. She selected one of the projects posted by JGI fungal … predictor of gene expression levels using machine learning tools. “This was very exciting to see how Rhondene …

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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus

… Back in 2011, JGI-supported researchers published a paper in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used …

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Shotgun metagenome data of a defined mock community using Oxford Nanopore, PacBio and Illumina technologies

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Microbial life under ice: Metagenome diversity and in situ activity of Verrucomicrobia in seasonally ice‐covered Lakes

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Genus-Wide Assessment of Lignocellulose Utilization in the Extremely Thermophilic Genus Caldicellulosiruptor by Genomic, Pangenomic, and Metagenomic Analyses

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FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus

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MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm

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Activity-based, genome-resolved metagenomics uncovers key populations and pathways involved in subsurface conversions of coal to methane