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Digging into Microbial Ecosystems Deep Underground
… in terms of nutrient cycles and biogeochemical cycles…. Viruses play a pretty important role in the cycling of … Amundson at Colorado State University have many questions about the microbial communities deep underground, and before … work builds off a proposal approved through a collaborative science initiative called Facilities Integrating …
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The Expanding Universe of Methane Metabolisms in Archaea
… insights into an ancient metabolism. Methane is a greenhouse gas 20 times more potent than carbon dioxide. Billions … the Integrated Microbial Genomes & Microbiomes (IMG/M) database maintained by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly available metagenome …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… be single bacterial cells, visible to the naked eye. The unusual size is notable because bacteria aren’t usually … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … explained. “This kind of discovery opens new questions about bacterial morphotypes that have never been studied …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… published in  The Proceedings of the National Academy of Sciences bridges this gap, by tracing the evolution of a … enzyme family evolved across 90 species. “One unique thing about this work was our focus on all the kingdoms, including animals, plants, bacteria, …
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David Goodstein
KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to facilitate expert curation of … responsible for genome annotation, comparative analysis and data distribution for the JGI's direct collaborators and the wider plant science community. Dr. Goodstein’s group also develops and …
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Tracking the Origins of Methane-Producing Microbes
… the total global methane production. They are thought to use billions of tons of the carbon dioxide trapped in … on the global carbon cycle. All methanogenic archaea use one of three pathways for methanogenesis: … published in the Proceedings of the National Academy of Sciences , researchers at Stanford University, the Chan …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
New studies show methanogenesis is not exclusively for Euryarchaeota. Atmospheric levels of methane, a … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Alternate Metabolic Pathways And there is something special about these new lineages recently tied to methanogenesis. …
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JGI@25: Stories from Intern Alumni
… our collaborations and capabilities to enable great science that will help solve energy and environmental … JGI has hosted interns from a number of universities and organizations. From field research and wet lab experiments, …
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Help from Citrus’ Bitter, Hardier Cousin
… disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never heard of trifoliate orange. Otherwise known as  Poncirus trifoliata , it’s an evolutionary cousin of the  Citrus … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Mateus Fiamenghi
Mateus’s research is focusing on the identification and analysis of Mobile Genetic Elements from Metagenomic Data.  Mateus’s GitHub …
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JGI announces 2024 New Investigator portfolio
… with DOE missions and from PIs who have not led any previously-accepted proposals — through the New Investigator call under our Community Science Program . Below find a list of researchers whose … December 2024 review. You can also find more information about the JGI’s various proposal calls here. …
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Antonio Camargo
Antonio’s research is focusing on the development of new methods for the … classification of Mobile Genetic Elements from metagenomic data.  Antonio's GitHub …
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