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Digging into Microbial Ecosystems Deep Underground
… approved through a collaborative science initiative called Facilities Integrating Collaborations for User … through the FICUS research support initiative proposal call.   …
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Habitat-Lite: A GSC Case Study Based on Free Text Terms for Environmental Metadata
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Operating Expenses
FY2023 Spending Profile The JGI is funded primarily by the DOE Office of Biological and Environmental Research …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… habitat range. But at what cost?  A collaborative team led by researchers at the University of Texas (UT) at Austin, … Switchgrass has multiple naturally occurring ploidy levels, called cytotypes, across the species. These are primarily … climate shifts. (C4 plants use a more efficient form of photosynthesis that reduces water loss, compared to the …
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Frederik Schulz
Dr. Frederik Schulz joined the DOE Joint Genome Institute in … sequence data. Dr. Schulz employs multi-omics (metagenomics, metatranscriptomics, single cell genomics and phylogenomics) and machine learning to find …
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Complete Genome Sequence for Asinibacterium sp. Strain OR53 and Draft Genome Sequence for Asinibacterium sp. Strain OR43, Two Bacteria Tolerant to Uranium
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JGI@25: Strengthening Soybean
… and oil was also the largest plant project completed by the JGI. It has since been cited more than 5,400 times, … fuel and things like that are not going to be replaced by electricity anytime soon,” Stacey said when we caught up … including INRAE as well as the Sainsbury Institute, by annotating not just one but three genomes for P. …
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Forming Scientific Connections and Building Community
… research is very sentimental to me.” Mentors: Crysten Blaby-Haas & Bikash Shrestha Project: “ Detecting Isotope Bonds … Project: “ Improving biosynthetic gene cluster annotation by leveraging a large genomic model ” Leonel Gonzalez : …
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JGI@25: Solving the Mystery of the Missing Oil
Berkeley Lab. Over the next decade, the JGI’s single cell genomics and metagenomics capabilities were harnessed in several Lab collaborations. The JGI’s single cell genomics expertise led to the identification of a new …
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Phylogenomic analysis of 589 metagenome-assembled genomes encompassing all major prokaryotic lineages from the gut of higher termites
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User Advisory Committees
… within the user community. … The SAC is a board convened by the JGI Director to provide a scientific and technical … scientific relevance and quality. … The IAC is chartered by the JGI Chief Informatics Officer (CIO) and reports to …
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Programs & Platform Leads
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