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… including researchers at the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, report the … the candidate bioenergy crop, switchgrass. Through the JGI’s Community Science Program , JGI sequenced and assembled near-complete genomes of P. …

… and fungi run the gamut from mutually beneficial to antagonistic. In fungi, 5mC is often found in transposable … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like … Robert Schmitz at the University of Georgia and including JGI researchers conducted the largest analysis to date of …

… Matthew Sullivan. He shared a few thoughts on his summer at JGI through a program that provides graduate thesis research …

… at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica … negative if the gene is actually essential. Through the JGI’s  Community Science Program , the scientists thus set … of sgRNA sequences: six for every gene in the genome. The JGI  DNA Synthesis Science team synthesized these sgRNAs, …

… New Investigator proposal was recently approved through the JGI Community Science Program, to use microbiome science to …

… snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … (Berkeley Lab). The work was enabled in part through JGI’s Community Science Program through a proposal akin to … This first paper integrating multi-omics data from this JGI fungal ENCODE proposal was  recently published in the  …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the fungal genomes used in the study are available on the JGI fungal portal  MycoCosm . The work builds upon several … with the first mycorrhizal genome sequence generated by the JGI more than a decade ago. Having these datasets will …

… in several years for students and researchers alike at the JGI. With the past few years upended by the pandemic, 2023 …

… A metagenomic look at the soil microbes present a year after a … helped fungi, bacteria and viruses survive. With this metagenomic analysis, it was possible to identify specific … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful …

… community genomes and expressed gene transcripts (metagenomes, metatranscriptomes), as well as the genomes of … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Lab), through the JGI Community Science Program . The metagenomes were also processed using the JGI-developed …

… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal … To search environmental data, they developed a two-stage metagenomic detection pipeline: First, they scanned over …