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Dealing with Drought: Uncovering Sorghum’s Secrets
… becoming common images in many regions due to more extreme weather events such as heat waves, droughts and floods. The … The field experiment is led by a consortium involving researchers from the University of California (UC), … is equipped to deal with adverse environmental conditions, researchers hope to improve yields for other crops under …
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JGI announces final round of 2022 Functional Genomics awardees
… Twice each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help translating genomic information into biological function. Through our CSP Functional …
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Yasuo Yoshikuni
… since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, and biosystems … JGI, Dr. Yoshikuni also manages the Synthetic Biology Pathway Engineering group. His research focus includes engineering of non-model yeasts for …
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JGI Announces 2026 New Investigator Portfolio
… Pictured from left: [Top row]: Emily G. Aguirre, Shauna M. Bennett, Laura Bogar, … Brittany N. Zepernick.    Each year, the JGI solicits novel research projects from PIs who have not led any previously … us to work and share our tools with a widening circle of researchers whose work aligns with the DOE’s Biological and …
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JGIota: Looking Back at Methane-Making Microbes
… We count on livestock for food and fiber, but raising these … down plant matter. So since 2010, the JGI has supported researchers studying those microbial methane-makers. … Sinead Leahy (New Zealand Agricultural Greenhouse Gas Research Centre) and Bill Kelly (AgResearch). …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing that stitches together large datasets with the assembler program MetaHipMer2. Oak Ridge National … terabytes of data with MetaHipMer2. And the National Energy Research Scientific Computing (NERSC) has another …
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From Competition to Cooperation
… The Science By comparing 135 fungal sequenced genomes, researchers were able to carry out a broader analysis than had ever been … species, such as nutrient transporters, were co-opted into symbiotic functions. Recently published in  Nature … the 1000 Fungal Genome projects (CSP # 662 & 1974). This research was also supported by the Laboratory of Excellence …
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JGI Scientists Pen Genome Watch Articles
… Tanja Woyke and other JGI researchers made their debut writing for … column last year — and there’s more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and …
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JGI@25: Stories from Intern Alumni
… 2022 marks the JGI’s 25th anniversary . Over the next few months, we’ll be revisiting a number of notable achievements that … from a number of universities and organizations. From field research and wet lab experiments, to computational modeling …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… full announcement “ Berkeley Lab Receives Multiple 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. … National Laboratory (Berkeley Lab), the National Energy Research Scientific Computing Center (NERSC), the DOE Joint … DOE’s Office of Science is the largest supporter of basic research in the physical sciences in the United States, and …
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iPHoP: A Matchmaker for Phages and their Hosts
… understand virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are … like bacteria, not humans. With metagenomic sequencing, researchers have found more of these viruses than ever … iPHoP program brings several of these approaches together into the same workflow, then uses a machine-learning model …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text … Laboratory (Berkeley Lab). And one of the tools that researchers can apply to study the transcription factors … genomes of different species. This can provide insights into how they orchestrate sets of genes to execute similar …
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