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Neha Varghese
… Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis …
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JGI on the 2020 Highly Cited Researchers List
… Congratulations to the 2020 Highly Cited Researchers at the JGI! They … highly-cited papers that rank in the top 1% by citations for field and year in the Web of Science.” Less than 6,200 … a gene related to seed dispersal in wild populations for the first time. I-Min Chen ,  Natalia Ivanova ,  Nikos …
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Training the Next Generation of Talent
… New Graduate Internship Program Builds Bridges Between DOE JGI, UC … Olmstead was back on campus at the University of California, Merced to start orientation as a first-year graduate … could be considered.” Olmstead’s project focused on the genetic mechanisms of chemotaxis in the Arabidopsis …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His … link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for …
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Yasuo Yoshikuni
… Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since … of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and applications. This … His research focus includes engineering of non-model yeasts for production of biofuels and renewable chemicals, …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … was being waged. In the JGI@25 video below, Susan Lucas, former JGI Production Department Head and current ESnet … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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Extracting the Secrets of Secondary Metabolites
… CRAGE-CRISPR combo helps further demystify biosynthetic gene … secondary metabolites, those molecules not essential for growth yet essential for survival, may now be easier to … is a technique researchers can use to integrate large genetic payloads directly into diverse microbes. Combining …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Puerto Nuevo is a small town along the Baja California coastline in Mexico. … waters and sediment with collaborators at the Center for Scientific Research and Higher Education at Ensenada …
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Discovery and ecogenomic context of a global Caldiserica-related phylum active in thawing permafrost, Candidatus Cryosericota phylum nov., Ca. Cryosericia class nov., Ca. Cryosericales ord. nov., Ca. Cryosericaceae fam. nov., comprising the four species
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address … soil and boosting biofuel feedstocks with less fertilizer. For millions of years, underground fungi have lived in … for tuning this symbiosis. “Those are great candidates for genetic engineering. Our hope is that the community at large …
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The Power of One, Amplified
… A preview of how large-scale single cell genomics … approaches including amplicon and metagenomic sequencing. For example, they showed that the composition of the … that species specific sets of single cells harbored mobile genetic elements that were missed within paired metagenome …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… Accepted proposals emphasize JGI interests in algae and … 80 full proposals, resulting from 95 letters of intent. For the first time, 63 percent of the accepted proposals … generating their  genome sequences to improve breeding by genetic improvements. Apomixis is asexual reproduction …
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