Results

DRAM for distilling microbial metabolism to automate the curation of microbiome function
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A functional microbiome catalogue crowdsourced from North American rivers
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Metagenome-Assembled Genomes from a Microbiome Grown in Dairy Manure Hydrolysate
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Host genotype controls ecological change in the leaf fungal microbiome
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Microbiome composition modulates secondary metabolism in a multispecies bacterial community
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EcoFABs: advancing microbiome science through standardized fabricated ecosystems
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Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation
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Party in the Rhizosphere
There’s a party in the soil, and microbes are the VIPs. They’re feasting on the … rhizosphere. In this episode, biologist Jennifer Pett-Ridge of Lawrence Livermore National Laboratory has your backstage …
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Trent Northen
SFA project. In 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods … to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the … … Metabolomics Science Program … Education … Selected Publications … Awards and Honors …
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Graduate Students Get Thesis Research Opportunity at the JGI
Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program … is Mo Kaze, part of the 2018 cohort of the JGI-UC Merced Genomics Internship Program. Kaze is part of Mark Sistrom’s lab … and the interactions of plants with their associated microbiomes. Tringe was also Kaze’s mentor during her 2018 …
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Bioactive diterpenoids impact the composition of the root-associated microbiome in maize (Zea mays)
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Plant compartment and genetic variation drive microbiome composition in switchgrass roots
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