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SPRUCE-ing Up Science
… of biology and computer science, to reveal clues about how microbial and bacteria communities influence the … edge developments in machine learning. Despite working alongside his scientific idols, Lawrence recalls feeling … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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Statement on the Use of Genomics Data
… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is … Agreement (2003), the JGI recognized the need to engage the community to inform necessary changes to JGI data policies. … are requested to be held until a specified date, or the publication date, whichever comes first. For nearly 40 …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… Tringe , JGI’s User Programs deputy and head of the Microbial Systems group through the  DOE Office of Science … Research (SCGSR) program . Her research project, “Microbial Community Structure and Methane Production in California’s Canal … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS … fluctuating environmental conditions. The team aims to functionally link gene families to photosynthesis and … Nevada mountain range since 2014 to learn more about the microbial responses and feedbacks to warming through the …
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John Vogel
… Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to this, … Dr. Vogel’s current research is focused on developing plant functional genomic resources (e.g. sequenced mutant … Brachypodium distachyon is a small annual grass that is well …
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Red seaweed supplementation suppresses methanogenesis in the rumen, revealing potentially advantageous traits among hydrogenotrophic bacteria
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Tomas Tyml
… Tomas uses traditional cultivation methods along with … and genomics to study endosymbiotic associations within microbial eukaryotes. He hopes to broaden our understanding …
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and biogeochemical cycles…. … at Colorado State University have many questions about the microbial communities deep underground, and before the …
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Nitrogen cycling microbiomes are structured by plant mycorrhizal associations with consequences for nitrogen oxide fluxes in forests
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Structural insights into bifunctional thaumarchaeal crotonyl-CoA hydratase and 3-hydroxypropionyl-CoA dehydratase from Nitrosopumilus maritimus
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Genome analyses reveal population structure and a purple stigma color gene candidate in finger millet
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A Natural Mechanism Can Turbocharge Viral Evolution
… The first step in the deadly dance between a virus and microbial cell is an embrace. For a virus with a “head-tail” … genomes. That means that those viruses accessed many more potential microbial cells or hosts. This ability isn’t … a fishing line, without harming the rest of the microbial community. The study’s publicly available dataset gives …
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