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… and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics … Publications … Selected Publications …

… opens the possibility of using phages to engineer microbial communities. One day, these phages could boost … workflow, then uses a machine-learning model to give its integrated prediction a confidence score. The result is a … Applied to 216,015 high-quality virus sequences in the IMG/VR database, the iPHoP program generated many new …

… in a temperate forest filled with Norway spruce trees, and microbial activity teems beneath your feet. Both bacteria … more active in fixing and metabolizing nitrogen, a key ecosystem nutrient. The Impact This study is the first to dig … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from …

… genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … that reveals in situ functional activities of specific microbial groups within complex communities.  The Microscale … analysis strategy for stable isotope probing metagenomics. mSystems 8:e01280-22. Volland et al. 2022.   A …