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… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how … complex wiring behind a city’s power grid. Just as the flow of electricity controls when and where lights turn on or … processes.  Traditionally, mapping this intricate network of regulatory “switches” in plants at a large scale was akin …

… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER … is discoverable and accessible. Linking the resources of powerful institutions like the JGI, KBase, NCBI, NMDC, … access to diverse datasets that deepen our understanding of how organisms interact with each other and with their …

… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science To better … reproduction, and the reproductive genes they regulate. The bacterial endosymbiont, Burkholderia , is recognized as a … sources of alternative fuels, so understanding fungal-bacterial relationships can shed light on how these …

… Register for the meeting here. Here are some sessions of interest (all times in PST unless otherwise noted): … December 7   9:15am PT (online) Town Hall on the role of user facilities in accelerating research and tips for … University of Arizona: “Spatial metabolic profiling in roots reveals plant specific responses to drought at the …

… The JGI was honored to host some of the brightest minds in genetics as part of our  2022 Annual Meeting . The meeting was a hybrid … keynote speeches from Nobel Laureate Jennifer Doudna of the University of California, Berkeley and Berkeley Lab, … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …

… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach to better understand … at protein function within them. The work was led by a team of scientists at the U.S. Department of Energy (DOE) Joint …

… Interns contributed to a number of projects, from refining lab protocols at the bench to … Liu Project:  Promoter Characterization of the Bacillota Bacterial Phylum Saray Maeda Mentors: Jonelle Basso, Heejung … of a computational pipeline to detect tailocin from bacterial growth Yibing Wang Mentors: Tomoya Honda, Dung Mai …

… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … N. crassa is the model organism for filamentous fungi, all of which contain a wide array of plant cell-wall degrading enzymes (PCWDEs) that allow …

… 21-23, 2023, attendees joined the JGI Annual Genomics of Energy & Environment Meeting.  A wide array of invited speakers shared how research infrastructure – DNA … most pressing energy and environment challenges. The JGI offers these solutions to the worldwide scientific community …

… begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, … the microbes within the soil. To get a clearer picture of how burned ecosystems return to health, researchers have … samples, they reconstructed and examined over six hundred bacterial genomes — mainly actinobacteria, as well as …

… sequencing projects carried out at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …

… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — … Filling in the Plant Tree of Life …